PURG protein (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PURG

Purine rich element binding protein G. (277 aa)

Predicted Functional Partners:

FMR1

0.547

TACC2

0.542

ALYREF

0.540

ADK

0.525

srsf1

0.476

TMEM64

0.447

IFI35

0.431

kat5

0.411

SGCG

0.405

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADK	PURG	ENSACAP00000008717	ENSACAP00000003116	Adenosine kinase.	Purine rich element binding protein G.	0.525
ALYREF	PURG	ENSACAP00000010333	ENSACAP00000003116	Aly/REF export factor.	Purine rich element binding protein G.	0.540
ALYREF	srsf1	ENSACAP00000010333	ENSACAP00000005429	Aly/REF export factor.	Uncharacterized protein.	0.902
FMR1	PURG	ENSACAP00000007816	ENSACAP00000003116	Fragile X mental retardation 1.	Purine rich element binding protein G.	0.547
IFI35	PURG	ENSACAP00000013276	ENSACAP00000003116	Interferon induced protein 35.	Purine rich element binding protein G.	0.431
PURG	ADK	ENSACAP00000003116	ENSACAP00000008717	Purine rich element binding protein G.	Adenosine kinase.	0.525
PURG	ALYREF	ENSACAP00000003116	ENSACAP00000010333	Purine rich element binding protein G.	Aly/REF export factor.	0.540
PURG	FMR1	ENSACAP00000003116	ENSACAP00000007816	Purine rich element binding protein G.	Fragile X mental retardation 1.	0.547
PURG	IFI35	ENSACAP00000003116	ENSACAP00000013276	Purine rich element binding protein G.	Interferon induced protein 35.	0.431
PURG	SGCG	ENSACAP00000003116	ENSACAP00000002925	Purine rich element binding protein G.	Sarcoglycan gamma.	0.405
PURG	TACC2	ENSACAP00000003116	ENSACAP00000017043	Purine rich element binding protein G.	Transforming acidic coiled-coil containing protein 2.	0.542
PURG	TMEM64	ENSACAP00000003116	ENSACAP00000010342	Purine rich element binding protein G.	Transmembrane protein 64.	0.447
PURG	kat5	ENSACAP00000003116	ENSACAP00000008731	Purine rich element binding protein G.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.411
PURG	srsf1	ENSACAP00000003116	ENSACAP00000005429	Purine rich element binding protein G.	Uncharacterized protein.	0.476
SGCG	PURG	ENSACAP00000002925	ENSACAP00000003116	Sarcoglycan gamma.	Purine rich element binding protein G.	0.405
TACC2	PURG	ENSACAP00000017043	ENSACAP00000003116	Transforming acidic coiled-coil containing protein 2.	Purine rich element binding protein G.	0.542
TMEM64	PURG	ENSACAP00000010342	ENSACAP00000003116	Transmembrane protein 64.	Purine rich element binding protein G.	0.447
kat5	PURG	ENSACAP00000008731	ENSACAP00000003116	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	Purine rich element binding protein G.	0.411
srsf1	ALYREF	ENSACAP00000005429	ENSACAP00000010333	Uncharacterized protein.	Aly/REF export factor.	0.902
srsf1	PURG	ENSACAP00000005429	ENSACAP00000003116	Uncharacterized protein.	Purine rich element binding protein G.	0.476