STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3AGeneral transcription factor IIIA. (331 aa)    
Predicted Functional Partners:
GTF3C1
General transcription factor IIIC subunit 1.
    
 0.821
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
   
 
 0.721
tbp
Uncharacterized protein.
   
 0.664
G1KJK4_ANOCA
SANT domain-containing protein.
    
 0.657
G1KV68_ANOCA
Uncharacterized protein.
    
 0.657
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.642
OPTN
Optineurin.
    
 0.630
POLR2L
RNA polymerase II subunit L.
    
 0.626
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.594
POLR1C
RNA polymerase I and III subunit C.
    
 0.581
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (38%) [HD]