STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEKDEK proto-oncogene. (380 aa)    
Predicted Functional Partners:
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.846
zgrf1
Uncharacterized protein.
    
 
 0.846
MYBBP1A
MYB binding protein 1a.
     
 0.805
baz1b
WSD domain-containing protein.
    
 0.781
DDX21
DExD-box helicase 21.
     
 0.746
myo1h
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.687
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.668
SRRM1
Serine and arginine repetitive matrix 1.
    
 
 0.663
RNPS1
RNA binding protein with serine rich domain 1.
   
  
 0.650
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.642
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.