Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDX2 | EOMES | ENSACAP00000003220 | ENSACAP00000013962 | Caudal type homeobox 2. | Eomesodermin. | 0.597 |
CDX2 | FGF4 | ENSACAP00000003220 | ENSACAP00000015792 | Caudal type homeobox 2. | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | 0.629 |
CDX2 | GATA3 | ENSACAP00000003220 | ENSACAP00000008932 | Caudal type homeobox 2. | GATA binding protein 3. | 0.543 |
CDX2 | GATA6 | ENSACAP00000003220 | ENSACAP00000007642 | Caudal type homeobox 2. | GATA binding protein 6. | 0.623 |
CDX2 | LOC100567055 | ENSACAP00000003220 | ENSACAP00000008205 | Caudal type homeobox 2. | IF rod domain-containing protein; Belongs to the intermediate filament family. | 0.531 |
CDX2 | NFKB2 | ENSACAP00000003220 | ENSACAP00000006109 | Caudal type homeobox 2. | Nuclear factor kappa B subunit 2. | 0.569 |
CDX2 | OGG1 | ENSACAP00000003220 | ENSACAP00000009823 | Caudal type homeobox 2. | 8-oxoguanine DNA glycosylase. | 0.631 |
CDX2 | TIMP2 | ENSACAP00000003220 | ENSACAP00000015956 | Caudal type homeobox 2. | TIMP metallopeptidase inhibitor 2. | 0.564 |
CDX2 | ace | ENSACAP00000003220 | ENSACAP00000012980 | Caudal type homeobox 2. | Angiotensin-converting enzyme. | 0.540 |
CDX2 | pou5f1 | ENSACAP00000003220 | ENSACAP00000017001 | Caudal type homeobox 2. | POU domain protein. | 0.585 |
EOMES | CDX2 | ENSACAP00000013962 | ENSACAP00000003220 | Eomesodermin. | Caudal type homeobox 2. | 0.597 |
EOMES | GATA3 | ENSACAP00000013962 | ENSACAP00000008932 | Eomesodermin. | GATA binding protein 3. | 0.659 |
EOMES | GATA6 | ENSACAP00000013962 | ENSACAP00000007642 | Eomesodermin. | GATA binding protein 6. | 0.485 |
EOMES | pou5f1 | ENSACAP00000013962 | ENSACAP00000017001 | Eomesodermin. | POU domain protein. | 0.515 |
FGF4 | CDX2 | ENSACAP00000015792 | ENSACAP00000003220 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Caudal type homeobox 2. | 0.629 |
FGF4 | pou5f1 | ENSACAP00000015792 | ENSACAP00000017001 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | POU domain protein. | 0.439 |
GATA3 | CDX2 | ENSACAP00000008932 | ENSACAP00000003220 | GATA binding protein 3. | Caudal type homeobox 2. | 0.543 |
GATA3 | EOMES | ENSACAP00000008932 | ENSACAP00000013962 | GATA binding protein 3. | Eomesodermin. | 0.659 |
GATA3 | GATA6 | ENSACAP00000008932 | ENSACAP00000007642 | GATA binding protein 3. | GATA binding protein 6. | 0.431 |
GATA6 | CDX2 | ENSACAP00000007642 | ENSACAP00000003220 | GATA binding protein 6. | Caudal type homeobox 2. | 0.623 |
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