STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD5Methyl-CpG binding domain protein 5. (1736 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.756
MBD4
Methyl-CpG binding domain 4, DNA glycosylase.
    
 
 0.701
H9GJ18_ANOCA
HARE-HTH domain-containing protein.
   
 0.665
BAP1
BRCA1 associated protein 1.
    
 0.653
KDM1B
Lysine demethylase 1B.
    
 0.611
RANBP2
RAN binding protein 2.
    
 0.545
HCFC1
Host cell factor C1.
    
 0.533
HCFC2
Host cell factor C2.
    
 0.533
LYPD6B
LY6/PLAUR domain containing 6B.
    
 0.524
KDM6B
Lysine demethylase 6B.
   
 0.452
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.