STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEMD3LEM domain containing 3. (821 aa)    
Predicted Functional Partners:
SMAD1
Mothers against decapentaplegic homolog.
   
 
 0.903
G1KWW8_ANOCA
LEM domain-containing protein.
     
 0.848
SMAD3
Mothers against decapentaplegic homolog.
   
 
 0.797
SMAD2
Mothers against decapentaplegic homolog.
   
 
 0.797
banf1
Uncharacterized protein.
   
 0.772
banf2
Uncharacterized protein.
   
 0.772
CDC5L
Cell division cycle 5 like.
   
 
 0.746
RBM25
RNA binding motif protein 25.
   
 0.675
LBR
Lamin B receptor.
     
 0.650
NAP1L1
Nucleosome assembly protein 1 like 1; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.640
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.