STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP6TNF alpha induced protein 6. (269 aa)    
Predicted Functional Partners:
PTX3
Pentraxin 3.
   
 
 0.790
G1KCR2_ANOCA
Link domain-containing protein.
     
 0.738
CXCL8
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 
 0.736
EREG
Epiregulin.
      
 0.686
FNTA
Farnesyltransferase, CAAX box, alpha.
      
 0.671
LOC100553449
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 
 0.659
col22a1
VWFA domain-containing protein.
    
 0.612
IL6
Interleukin 6.
   
  
 0.608
chrd
Chordin; Belongs to the chordin family.
    
 
 0.598
has2
Uncharacterized protein.
   
  
 0.587
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.