STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA1Integrin subunit alpha 1; Belongs to the integrin alpha chain family. (1187 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.958
FN1
Fibronectin 1.
    
 0.949
SRC
Tyrosine-protein kinase.
    
  0.906
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.896
COL4A2
Collagen type IV alpha 2 chain.
     
 0.870
TLN2
Uncharacterized protein.
    
 0.845
TLN1
Talin 1.
    
 0.845
itgb3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.829
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.827
COL6A2
Collagen type VI alpha 2 chain.
   
 
 0.808
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.