Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CISD1CDGSH iron sulfur domain 1. (108 aa)    
Predicted Functional Partners:
cisd3
Uncharacterized protein.
   
  
 0.917
Park2
RBR-type E3 ubiquitin transferase.
    
 
 0.725
CARS1
Cysteinyl-tRNA synthetase.
      
 0.709
CARS2
Cysteinyl-tRNA synthetase 2, mitochondrial.
      
 0.680
TOMM70
Translocase of outer mitochondrial membrane 70.
      
 0.675
MIEN1
Migration and invasion enhancer 1.
   
  
 0.630
HSBP1
Heat shock factor binding protein 1.
      
 0.609
DDB1
Damage specific DNA binding protein 1.
    
 
 0.590
ST3GAL4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
      
 0.585
EMC2
ER membrane protein complex subunit 2.
      
 0.571
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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