STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPER4Cation channel sperm associated 4. (408 aa)    
Predicted Functional Partners:
CATSPER3
Cation channel sperm associated 3.
  
0.963
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 0.949
LOC100555851
Ion_trans domain-containing protein.
  
0.948
Catsper1
Ion_trans domain-containing protein.
  
 
0.947
H9GSM9_ANOCA
Uncharacterized protein.
    
 0.848
Cacna1a
Ion_trans domain-containing protein.
  
 0.804
tmem249
Uncharacterized protein.
    
   0.748
EFCAB9
EF-hand calcium binding domain 9.
    
 
 0.737
LOC100557448
Uncharacterized protein.
    
 0.683
H9G9Q8_ANOCA
Uncharacterized protein.
  
0.683
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.