STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCB1IQ motif containing B1. (629 aa)    
Predicted Functional Partners:
CEP290
Centrosomal protein 290.
    
 
 0.942
RAB11A
RAB11A, member RAS oncogene family.
   
 0.786
rpgr
Uncharacterized protein.
   
 
 0.701
GPR137C
G protein-coupled receptor 137C.
      
 0.679
rabl2a
Uncharacterized protein.
   
 0.661
NPHP1
Nephrocystin 1.
    
 0.660
rab3ip
Sec2p domain-containing protein.
    
 0.647
NPHP4
Nephrocystin 4.
    
 
 0.622
RPGRIP1L
RPGRIP1 like.
    
 
 0.613
Syce2
Uncharacterized protein.
      
 0.590
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.