STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF7Ring finger protein 7. (116 aa)    
Predicted Functional Partners:
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.999
ELOB
Elongin B.
   
 0.995
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.993
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.982
UBXN7
UBX domain-containing protein 7.
    
 0.980
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.976
DDB1
Damage specific DNA binding protein 1.
    
 0.942
ube2f
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.921
SKP2
S-phase kinase associated protein 2.
    
 0.912
COPS4
COP9 signalosome subunit 4.
   
 0.899
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.