Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNAP47Synaptosome associated protein 47. (422 aa)    
Predicted Functional Partners:
STX18
Syntaxin 18.
    
 0.995
LOC100556109
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.986
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
    
 0.986
VAMP8
Vesicle associated membrane protein 8.
   
 0.981
STX7
Syntaxin 7; Belongs to the syntaxin family.
    
 0.978
vamp2
V-SNARE coiled-coil homology domain-containing protein.
   
 0.975
SNAP29
Synaptosome associated protein 29.
     
 0.964
LOC100556505
V-SNARE coiled-coil homology domain-containing protein.
   
 0.963
VAMP1
Vesicle associated membrane protein 1.
   
 0.963
Vti1a
Uncharacterized protein.
    
 0.963
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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