Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MIF4GDMIF4G domain containing. (270 aa)    
Predicted Functional Partners:
DDX25
DEAD-box helicase 25.
    
   0.799
Slbp
SLBP_RNA_bind domain-containing protein.
    
 
 0.750
ZCCHC17
Zinc finger CCHC-type containing 17.
    
 
 0.586
FNTA
Farnesyltransferase, CAAX box, alpha.
      
 0.574
SLC25A19
Solute carrier family 25 member 19; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
 
    0.523
SRP72
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
      
 0.517
RNMT
mRNA cap guanine-N7 methyltransferase.
      
 0.489
EIF2B3
Eukaryotic translation initiation factor 2B subunit gamma.
      
 0.487
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
      
 0.485
KCTD2
Potassium channel tetramerization domain containing 2.
    
 
 0.432
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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