STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2l6UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.996
ARIH1
RBR-type E3 ubiquitin transferase.
   
 0.982
UBE2L3
Ubiquitin conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
  
0.937
Park2
RBR-type E3 ubiquitin transferase.
    
 0.901
isg15
Uncharacterized protein.
   
 0.883
RNF217
RBR-type E3 ubiquitin transferase.
   
 0.879
rps27a
Ubiquitin-like domain-containing protein.
   
 0.869
ubc
Uncharacterized protein.
   
 0.866
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.824
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.820
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.