Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATXN1L | ZNF821 | ENSACAP00000019818 | ENSACAP00000007821 | Ataxin 1 like. | Zinc finger protein 821. | 0.572 |
DHX38 | TRMT6 | ENSACAP00000008054 | ENSACAP00000000548 | DEAH-box helicase 38. | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.420 |
DHX38 | TXNL4B | ENSACAP00000008054 | ENSACAP00000011634 | DEAH-box helicase 38. | Thioredoxin like 4B. | 0.460 |
DHX38 | ZNF821 | ENSACAP00000008054 | ENSACAP00000007821 | DEAH-box helicase 38. | Zinc finger protein 821. | 0.462 |
ELF1 | ZNF821 | ENSACAP00000000680 | ENSACAP00000007821 | E74 like ETS transcription factor 1. | Zinc finger protein 821. | 0.465 |
ELF2 | ZNF821 | ENSACAP00000001965 | ENSACAP00000007821 | E74 like ETS transcription factor 2. | Zinc finger protein 821. | 0.455 |
RIN2 | ZNF821 | ENSACAP00000005137 | ENSACAP00000007821 | Ras and Rab interactor 2. | Zinc finger protein 821. | 0.479 |
TRMT6 | DHX38 | ENSACAP00000000548 | ENSACAP00000008054 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | DEAH-box helicase 38. | 0.420 |
TRMT6 | TRMT61A | ENSACAP00000000548 | ENSACAP00000022834 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.999 |
TRMT6 | ZNF821 | ENSACAP00000000548 | ENSACAP00000007821 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | Zinc finger protein 821. | 0.520 |
TRMT61A | TRMT6 | ENSACAP00000022834 | ENSACAP00000000548 | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.999 |
TRMT61A | ZNF821 | ENSACAP00000022834 | ENSACAP00000007821 | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | Zinc finger protein 821. | 0.545 |
TXNL4B | DHX38 | ENSACAP00000011634 | ENSACAP00000008054 | Thioredoxin like 4B. | DEAH-box helicase 38. | 0.460 |
TXNL4B | ZNF821 | ENSACAP00000011634 | ENSACAP00000007821 | Thioredoxin like 4B. | Zinc finger protein 821. | 0.493 |
ZNF821 | ATXN1L | ENSACAP00000007821 | ENSACAP00000019818 | Zinc finger protein 821. | Ataxin 1 like. | 0.572 |
ZNF821 | DHX38 | ENSACAP00000007821 | ENSACAP00000008054 | Zinc finger protein 821. | DEAH-box helicase 38. | 0.462 |
ZNF821 | ELF1 | ENSACAP00000007821 | ENSACAP00000000680 | Zinc finger protein 821. | E74 like ETS transcription factor 1. | 0.465 |
ZNF821 | ELF2 | ENSACAP00000007821 | ENSACAP00000001965 | Zinc finger protein 821. | E74 like ETS transcription factor 2. | 0.455 |
ZNF821 | RIN2 | ENSACAP00000007821 | ENSACAP00000005137 | Zinc finger protein 821. | Ras and Rab interactor 2. | 0.479 |
ZNF821 | TRMT6 | ENSACAP00000007821 | ENSACAP00000000548 | Zinc finger protein 821. | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.520 |
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