STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX15T-box transcription factor 15. (609 aa)    
Predicted Functional Partners:
TBX2
T-box transcription factor 2.
 
    
 0.706
WARS2
Tryptophanyl tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.692
SHOX
Short stature homeobox.
   
 
 0.601
MYC
Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.
     
  0.522
HOXD11
Homeobox D11.
   
 
 0.477
HMX3
H6 family homeobox 3.
    
 
 0.454
TRIB2
Tribbles pseudokinase 2.
      
 0.424
SALL1
Spalt like transcription factor 1.
   
  
 0.411
LOC100564704
TLE family member 1, transcriptional corepressor.
    
 
 0.410
TCF21
Transcription factor 21.
      
 0.404
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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