STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D20TBC1 domain family member 20. (394 aa)    
Predicted Functional Partners:
LOC100566712
Uncharacterized protein.
    
 0.813
RAB1B
RAB1B, member RAS oncogene family.
    
 0.813
RAB33B
RAB33B, member RAS oncogene family.
    
 0.586
RAB33A
RAB33A, member RAS oncogene family.
    
 0.586
RAB43
RAB43, member RAS oncogene family.
    
 0.585
RABL6
RAB, member RAS oncogene family like 6.
    
 0.548
LOC100553105
Uncharacterized protein.
    
 0.548
CGNL1
Cingulin like 1.
    
 0.548
TBC1D5
TBC1 domain family member 5.
    
 
 0.448
TBC1D16
TBC1 domain family member 16.
      
 0.443
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.