STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCE1Ras converting CAAX endopeptidase 1. (316 aa)    
Predicted Functional Partners:
FNTA
Farnesyltransferase, CAAX box, alpha.
     
 0.985
LOC100559827
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.977
ZMPSTE24
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 
 0.834
CHURC1
Churchill domain containing 1.
    
 0.782
USP42
Ubiquitin specific peptidase 42; Belongs to the peptidase C19 family.
     
 0.680
usp36
Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family.
     
 0.680
OMA1
OMA1 zinc metallopeptidase.
    
 
 0.674
DHDDS
Alkyl transferase; Belongs to the UPP synthase family.
      
 0.531
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.529
REM1
RRAD and GEM like GTPase 1.
    
 0.519
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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