STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100557787Tyrosine-protein kinase receptor. (321 aa)    
Predicted Functional Partners:
ntrk3
Ig-like domain-containing protein.
 
      0.899
NTF4
Neurotrophin 4; Belongs to the NGF-beta family.
    
 0.782
NTF3
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 0.769
BDNF
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
   
 0.756
LOC100567025
Ig-like domain-containing protein.
 
  
 0.737
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.714
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.714
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.714
SHC1
SHC adaptor protein 1.
   
 0.658
GRB2
Growth factor receptor bound protein 2.
    
 0.559
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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