STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubr7UBR-type domain-containing protein. (429 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
 
    
 0.695
NASP
Nuclear autoantigenic sperm protein.
   
 
 0.623
TRIP12
Thyroid hormone receptor interactor 12.
      
 0.550
CHAF1B
Chromatin assembly factor 1 subunit B.
      
 0.501
DYM
Dymeclin.
      
 0.475
TTC13
Tetratricopeptide repeat domain 13.
      
 0.463
UBE2S
Ubiquitin conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.454
BTBD7
BTB domain containing 7.
      
 0.445
NEMP1
Nuclear envelope integral membrane protein 1.
      
 0.444
Ubr3
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
      
 0.435
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.