STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS9Bardet-Biedl syndrome 9. (881 aa)    
Predicted Functional Partners:
bbs1
BBS1 domain-containing protein.
    
 0.997
BBS2
Bardet-Biedl syndrome 2 protein homolog.
   
 0.996
BBS4
Bardet-Biedl syndrome 4.
   
 0.995
TTC8
Tetratricopeptide repeat domain 8.
  
 
 0.995
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.994
bbs5
Uncharacterized protein.
   
 0.988
LZTFL1
Leucine zipper transcription factor like 1.
    
 0.920
bbip1
Uncharacterized protein.
    
 0.906
G1KFP1_ANOCA
BTB domain-containing protein.
   
 0.850
LOC100553030
BTB domain-containing protein.
   
 0.850
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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