STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alms1ALMS_motif domain-containing protein. (1189 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.756
PLK1
Polo like kinase 1.
    
  0.686
OTOGL
Otogelin like.
    
 0.670
PCDH15
Protocadherin related 15.
     
 0.660
IFT88
Intraflagellar transport 88.
    
 0.651
RAB11A
RAB11A, member RAS oncogene family.
    
  0.583
PLK2
Serine/threonine-protein kinase PLK.
    
  0.562
PLK3
Serine/threonine-protein kinase PLK.
    
  0.562
rab3ip
Sec2p domain-containing protein.
    
  0.559
bbs1
BBS1 domain-containing protein.
    
 
 0.510
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.