STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD3FAST kinase domains 3. (662 aa)    
Predicted Functional Partners:
FASTKD2
FAST kinase domains 2.
   
 
0.587
MTRR
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
   
  
 0.587
MRPS31
Mitochondrial ribosomal protein S31.
    
 
 0.562
DHX30
DExH-box helicase 30.
    
 
 0.550
IARS2
Isoleucyl-tRNA synthetase 2, mitochondrial.
  
 
 0.540
MRPS22
Mitochondrial ribosomal protein S22.
   
 
 0.539
GFM1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]
  
 
 0.523
MIPEP
Mitochondrial intermediate peptidase.
   
 
 0.517
SMTNL1
Smoothelin like 1.
   
  
 0.488
MTO1
Mitochondrial tRNA translation optimization 1.
   
 
 0.481
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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