STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC80Coiled-coil domain containing 80. (950 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.763
BRS3
Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.
      
 0.560
RANBP2
RAN binding protein 2.
   
 
  0.556
FBLN2
Fibulin 2.
   
 0.512
COL6A1
Collagen type VI alpha 1 chain.
   
 
 0.488
G1KAJ8_ANOCA
FA_FANCE domain-containing protein.
  
   0.486
FBLN5
Fibulin 5.
   
 0.475
FBN2
Fibrillin 2.
   
 0.465
LOXL3
Lysyl oxidase like 3.
    
 0.461
GLE1
GLE1 RNA export mediator.
    
 0.445
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.