STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (257 aa)    
Predicted Functional Partners:
srsf2
RRM domain-containing protein.
  
 0.703
hnrnpc
RRM domain-containing protein.
   
 0.665
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
  
0.636
srsf1
Uncharacterized protein.
   
 0.587
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.583
hnrnph1
Uncharacterized protein.
   
 0.576
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.569
FUS
FUS RNA binding protein.
   
 0.567
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.564
rps27a
Ubiquitin-like domain-containing protein.
   
  0.559
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.