STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA5ASemaphorin 5A. (1074 aa)    
Predicted Functional Partners:
PVALB
Parvalbumin; Belongs to the parvalbumin family.
      
 0.688
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.663
MST1R
Macrophage stimulating 1 receptor.
    
 0.645
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.645
PLXNC1
Plexin C1.
    
 0.639
PLXNB2
Plexin B2.
    
0.638
PLXNB3
Plexin B3.
    
 0.604
PLXNB1
Plexin B1.
    
0.604
Sema6d
Uncharacterized protein.
 
    
 0.541
PLXNA2
Plexin A2.
    
 0.515
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.