abcf1 protein (Anolis carolinensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

abcf1

Uncharacterized protein. (859 aa)

Predicted Functional Partners:

MRPL20

0.909

ABCE1

0.903

MRPL27

0.897

RPL35

0.890

RPS18

0.883

RPL23A

0.882

RPL11

0.879

MRPL21

0.873

rps3

0.864

RPL23

0.864

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCE1	RPL11	ENSACAP00000003393	ENSACAP00000004963	ATP binding cassette subfamily E member 1.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.575
ABCE1	RPL23	ENSACAP00000003393	ENSACAP00000012883	ATP binding cassette subfamily E member 1.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.889
ABCE1	RPL23A	ENSACAP00000003393	ENSACAP00000005194	ATP binding cassette subfamily E member 1.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.712
ABCE1	RPL35	ENSACAP00000003393	ENSACAP00000003956	ATP binding cassette subfamily E member 1.	Ribosomal protein L35.	0.685
ABCE1	RPS18	ENSACAP00000003393	ENSACAP00000002877	ATP binding cassette subfamily E member 1.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.913
ABCE1	abcf1	ENSACAP00000003393	ENSACAP00000010433	ATP binding cassette subfamily E member 1.	Uncharacterized protein.	0.903
ABCE1	rps3	ENSACAP00000003393	ENSACAP00000002108	ATP binding cassette subfamily E member 1.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.955
MRPL20	MRPL21	ENSACAP00000008943	ENSACAP00000013507	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	Mitochondrial ribosomal protein L21.	0.999
MRPL20	MRPL27	ENSACAP00000008943	ENSACAP00000005136	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	Mitochondrial ribosomal protein L27.	0.999
MRPL20	RPL11	ENSACAP00000008943	ENSACAP00000004963	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.999
MRPL20	RPL23	ENSACAP00000008943	ENSACAP00000012883	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.999
MRPL20	RPL23A	ENSACAP00000008943	ENSACAP00000005194	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.999
MRPL20	RPL35	ENSACAP00000008943	ENSACAP00000003956	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	Ribosomal protein L35.	0.999
MRPL20	RPS18	ENSACAP00000008943	ENSACAP00000002877	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.999
MRPL20	abcf1	ENSACAP00000008943	ENSACAP00000010433	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	Uncharacterized protein.	0.909
MRPL20	rps3	ENSACAP00000008943	ENSACAP00000002108	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.999
MRPL21	MRPL20	ENSACAP00000013507	ENSACAP00000008943	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.999
MRPL21	MRPL27	ENSACAP00000013507	ENSACAP00000005136	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L27.	0.999
MRPL21	RPL11	ENSACAP00000013507	ENSACAP00000004963	Mitochondrial ribosomal protein L21.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.999
MRPL21	RPL23	ENSACAP00000013507	ENSACAP00000012883	Mitochondrial ribosomal protein L21.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.999