STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDAC11Histone deacetylase 11. (337 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.827
ARID4A
AT-rich interaction domain 4A.
    
 0.827
ncor1
Uncharacterized protein.
    
 0.719
NCOR2
Nuclear receptor corepressor 2.
    
 0.719
SIRT4
NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.
    
 
 0.667
SNW1
SNW domain containing 1.
    
  0.656
SIRT1
Sirtuin 1.
    
 
 0.650
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.648
rbbp4
RB binding protein 4, chromatin remodeling factor.
   
 0.635
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.634
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.