Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACTR8 | HMG20A | ENSACAP00000011567 | ENSACAP00000011279 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | High mobility group 20A. | 0.608 |
GATAD2B | HMG20A | ENSACAP00000008646 | ENSACAP00000011279 | GATA zinc finger domain containing 2B. | High mobility group 20A. | 0.582 |
GATAD2B | KDM1A | ENSACAP00000008646 | ENSACAP00000016707 | GATA zinc finger domain containing 2B. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.726 |
GATAD2B | PHF21A | ENSACAP00000008646 | ENSACAP00000014715 | GATA zinc finger domain containing 2B. | PHD finger protein 21A. | 0.802 |
GATAD2B | RCOR1 | ENSACAP00000008646 | ENSACAP00000000188 | GATA zinc finger domain containing 2B. | REST corepressor 1. | 0.603 |
GATAD2B | RCOR2 | ENSACAP00000008646 | ENSACAP00000012172 | GATA zinc finger domain containing 2B. | REST corepressor 2. | 0.479 |
GATAD2B | RCOR3 | ENSACAP00000008646 | ENSACAP00000016135 | GATA zinc finger domain containing 2B. | REST corepressor 3. | 0.479 |
HMG20A | ACTR8 | ENSACAP00000011279 | ENSACAP00000011567 | High mobility group 20A. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.608 |
HMG20A | GATAD2B | ENSACAP00000011279 | ENSACAP00000008646 | High mobility group 20A. | GATA zinc finger domain containing 2B. | 0.582 |
HMG20A | KDM1A | ENSACAP00000011279 | ENSACAP00000016707 | High mobility group 20A. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.829 |
HMG20A | LOC103282303 | ENSACAP00000011279 | ENSACAP00000000442 | High mobility group 20A. | Uncharacterized protein. | 0.602 |
HMG20A | PHF14 | ENSACAP00000011279 | ENSACAP00000013062 | High mobility group 20A. | PHD finger protein 14. | 0.655 |
HMG20A | PHF21A | ENSACAP00000011279 | ENSACAP00000014715 | High mobility group 20A. | PHD finger protein 21A. | 0.725 |
HMG20A | PPCDC | ENSACAP00000011279 | ENSACAP00000016881 | High mobility group 20A. | Phosphopantothenoylcysteine decarboxylase. | 0.591 |
HMG20A | RCOR1 | ENSACAP00000011279 | ENSACAP00000000188 | High mobility group 20A. | REST corepressor 1. | 0.780 |
HMG20A | RCOR2 | ENSACAP00000011279 | ENSACAP00000012172 | High mobility group 20A. | REST corepressor 2. | 0.614 |
HMG20A | RCOR3 | ENSACAP00000011279 | ENSACAP00000016135 | High mobility group 20A. | REST corepressor 3. | 0.614 |
KDM1A | GATAD2B | ENSACAP00000016707 | ENSACAP00000008646 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | GATA zinc finger domain containing 2B. | 0.726 |
KDM1A | HMG20A | ENSACAP00000016707 | ENSACAP00000011279 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | High mobility group 20A. | 0.829 |
KDM1A | PHF21A | ENSACAP00000016707 | ENSACAP00000014715 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | PHD finger protein 21A. | 0.964 |
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