STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDIL3EGF like repeats and discoidin domains 3. (480 aa)    
Predicted Functional Partners:
hephl1
Uncharacterized protein; Belongs to the multicopper oxidase family.
 
 
    0.720
cp
Uncharacterized protein; Belongs to the multicopper oxidase family.
 
 
    0.691
PROS1
Protein S.
   
 0.635
MCFD2
Multiple coagulation factor deficiency 2.
     
 0.574
SLC40A1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.563
LMAN1
Lectin, mannose binding 1.
    
 0.544
CTSC
Cathepsin C; Belongs to the peptidase C1 family.
   
 
 0.498
ATP7A
ATPase copper transporting alpha.
  
 
 0.495
ATP7B
ATPase copper transporting beta.
  
 
 0.495
CRIM1
Cysteine rich transmembrane BMP regulator 1.
    
 0.488
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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