STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC7Zinc finger CCHC-type containing 7. (580 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 0.967
TENT4A
Terminal nucleotidyltransferase 4A.
   
 0.950
TENT4B
Terminal nucleotidyltransferase 4B.
   
 0.950
ZCCHC8
Zinc finger CCHC-type containing 8.
     
 0.719
SKIV2L
Ski2 like RNA helicase.
   
 
 0.661
EXOSC1
Exosome component 1.
   
  
 0.631
EXOSC9
Exosome component 9.
   
  
 0.619
EXOSC4
Exosome component 4.
   
  
 0.600
C1D
C1D nuclear receptor corepressor.
   
 
 0.596
rbm7
RRM domain-containing protein.
   
  
 0.593
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.