STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXODecapping exoribonuclease. (411 aa)    
Predicted Functional Partners:
XRN2
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
   
 
 0.997
exosc7
RNase_PH domain-containing protein.
   
   0.841
LOC100560496
Exosome component 7.
   
   0.841
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
    
 
 0.830
FBF1
Fas binding factor 1.
    
 
 0.830
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
    
 
 0.830
DCP2
Decapping mRNA 2.
      
 0.632
RPRD2
Regulation of nuclear pre-mRNA domain containing 2.
    
 
 0.623
CCDC66
Coiled-coil domain containing 66.
    
 
 0.623
NOL9
Nucleolar protein 9.
   
 
 0.609
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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