STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDB1LIM domain binding 1. (411 aa)    
Predicted Functional Partners:
LMO2
LIM domain only 2.
    
 0.938
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.917
LMO1
LIM domain only 1.
    
 0.821
LMO3
LIM domain only 3.
    
 0.821
ISL1
ISL LIM homeobox 1.
    
 0.815
SSBP3
Single stranded DNA binding protein 3.
   
 
 0.742
SSBP2
Single stranded DNA binding protein 2.
   
 
 0.742
GATA1
GATA binding protein 1.
    
 0.731
GATA2
GATA binding protein 2.
    
 0.727
LHX9
LIM homeobox 9.
    
 0.720
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.