STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX40DEAH-box helicase 40. (741 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
  0.812
utp14a
Uncharacterized protein.
   
 0.797
SLU7
SLU7 homolog, splicing factor.
   
 0.784
UTP3
UTP3 small subunit processome component.
   
 0.783
UTP25
UTP25 small subunit processor component.
   
 0.774
prpf18
SFM domain-containing protein.
   
 0.767
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.764
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.762
NOP14
NOP14 nucleolar protein.
 
 
 0.761
UTP18
UTP18 small subunit processome component.
   
 0.758
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.