STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXHD1Lipoxygenase homology domains 1. (2071 aa)    
Predicted Functional Partners:
SLC26A5
Solute carrier family 26 member 5.
   
  
 0.686
F13A1
Coagulation factor XIII A chain.
      
 0.573
ADGRV1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.540
ASPM
Abnormal spindle microtubule assembly.
      
 0.500
Ush2a
Uncharacterized protein.
    
 0.494
Adgrb1
G_PROTEIN_RECEP_F2_4 domain-containing protein.
      
 0.487
CDH23
Cadherin related 23.
     
 0.466
GRXCR1
Glutaredoxin and cysteine rich domain containing 1.
      
 0.454
KLHL18
Kelch like family member 18.
    
 0.442
WHRN
Whirlin.
    
 
 0.431
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.