STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLA2G7Platelet-activating factor acetylhydrolase. (394 aa)    
Predicted Functional Partners:
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
     
 0.941
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
     
 0.915
LPCAT4
Lysophosphatidylcholine acyltransferase 4.
     
 0.904
PAFAH2
Platelet-activating factor acetylhydrolase.
  
  
 
0.903
CEPT1
Choline/ethanolamine phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.902
TRAPPC8
Trafficking protein particle complex 8.
      
 0.803
RNF138
Ring finger protein 138.
      
 0.766
PLA2G4A
Phospholipase A2.
     
 0.730
LOC100568171
Phospholipase A(2).
     
 0.692
LOC100562853
LRAT domain-containing protein.
     
 0.686
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.