STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSX1Visual system homeobox 1. (343 aa)    
Predicted Functional Partners:
ATOH7
Atonal bHLH transcription factor 7.
   
  
 0.612
ISL1
ISL LIM homeobox 1.
   
  
 0.608
FOXN4
Forkhead box N4.
   
  
 0.593
PTF1A
Pancreas associated transcription factor 1a.
   
  
 0.571
SCGN
Secretagogin, EF-hand calcium binding protein.
      
 0.538
NXNL1
Nucleoredoxin like 1.
   
  
 0.498
NR2E3
Nuclear receptor subfamily 2 group E member 3.
   
  
 0.491
TMEM215
Transmembrane protein 215.
      
 0.454
ARR3
Arrestin 3.
   
  
 0.452
RLBP1
Retinaldehyde binding protein 1.
      
 0.451
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.