STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPCAMEpithelial cell adhesion molecule. (177 aa)    
Predicted Functional Partners:
vil1
HP domain-containing protein.
      
 0.659
VILL
Villin like.
      
 0.659
G1KCR2_ANOCA
Link domain-containing protein.
      
 0.635
MSH2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.551
FABP2
Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.542
alpi
Alkaline phosphatase.
      
 0.523
MSH6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.511
MLH1
MutL homolog 1.
      
 0.459
CLDN1
Claudin 1.
  
 
 0.447
PLS1
Plastin 1.
   
  
 0.435
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.