STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9GLA6_ANOCAUncharacterized protein. (490 aa)    
Predicted Functional Partners:
POLR2M
RNA polymerase II subunit M.
 
      0.885
TNNT2
Troponin T2, cardiac type.
   
 0.609
TNNT3
Troponin T3, fast skeletal type.
   
 0.609
SMIM20
Small integral membrane protein 20.
   
 0.609
gatd1
Uncharacterized protein.
   
 0.609
TNNT1
Troponin T1, slow skeletal type.
   
 0.609
SH3RF3
SH3 domain containing ring finger 3.
   
  0.572
MYO9A
Myosin IXA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.556
myo9b
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.556
TNNI1
Troponin I1, slow skeletal type.
   
 0.520
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.