STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA1ATP binding cassette subfamily A member 1. (2258 aa)    
Predicted Functional Partners:
apoe
Uncharacterized protein.
   
 0.593
NR1H3
Nuclear receptor subfamily 1 group H member 3.
    
 0.534
NR1H2
Nuclear receptor subfamily 1 group H member 2.
    
 0.534
ABCC5
ATP binding cassette subfamily C member 5.
   
 0.529
ADORA2A
Adenosine receptor A2; Receptor for adenosine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Belongs to the G-protein coupled receptor 1 family.
      
 0.491
ABCE1
ATP binding cassette subfamily E member 1.
   
  
 0.483
RXRA
Retinoid X receptor alpha.
    
 0.456
APOB
Apolipoprotein B.
      
 0.454
SCARB1
Scavenger receptor class B member 1; Belongs to the CD36 family.
   
  
 0.453
CD36
CD36 molecule; Belongs to the CD36 family.
   
  
 0.451
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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