XK protein (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

XK

XK-related protein. (542 aa)

Predicted Functional Partners:

CYBA

0.771

NCF1

0.701

NOX4

0.650

Noxo1

0.647

kel

0.611

ncf2

0.573

LOC103282746

0.573

H9GBP2_ANOCA

0.572

SUOX

0.513

ALDH18A1

0.509

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDH18A1	NOX4	ENSACAP00000004506	ENSACAP00000014675	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	NADPH oxidase 4.	0.509
ALDH18A1	XK	ENSACAP00000004506	ENSACAP00000014627	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	XK-related protein.	0.509
CYBA	LOC103282746	ENSACAP00000006491	ENSACAP00000021163	Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.	SH3 domain-containing protein.	0.795
CYBA	NCF1	ENSACAP00000006491	ENSACAP00000018714	Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.	Neutrophil cytosolic factor 1.	0.943
CYBA	NOX4	ENSACAP00000006491	ENSACAP00000014675	Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.	NADPH oxidase 4.	0.976
CYBA	Noxo1	ENSACAP00000006491	ENSACAP00000002329	Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.	SH3 domain-containing protein.	0.886
CYBA	XK	ENSACAP00000006491	ENSACAP00000014627	Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.	XK-related protein.	0.771
CYBA	ncf2	ENSACAP00000006491	ENSACAP00000014871	Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.	Uncharacterized protein.	0.863
H9GBP2_ANOCA	NOX4	ENSACAP00000006470	ENSACAP00000014675	Uncharacterized protein.	NADPH oxidase 4.	0.601
H9GBP2_ANOCA	XK	ENSACAP00000006470	ENSACAP00000014627	Uncharacterized protein.	XK-related protein.	0.572
LOC103282746	CYBA	ENSACAP00000021163	ENSACAP00000006491	SH3 domain-containing protein.	Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.	0.795
LOC103282746	NCF1	ENSACAP00000021163	ENSACAP00000018714	SH3 domain-containing protein.	Neutrophil cytosolic factor 1.	0.939
LOC103282746	NOX4	ENSACAP00000021163	ENSACAP00000014675	SH3 domain-containing protein.	NADPH oxidase 4.	0.649
LOC103282746	Noxo1	ENSACAP00000021163	ENSACAP00000002329	SH3 domain-containing protein.	SH3 domain-containing protein.	0.767
LOC103282746	XK	ENSACAP00000021163	ENSACAP00000014627	SH3 domain-containing protein.	XK-related protein.	0.573
NCF1	CYBA	ENSACAP00000018714	ENSACAP00000006491	Neutrophil cytosolic factor 1.	Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.	0.943
NCF1	LOC103282746	ENSACAP00000018714	ENSACAP00000021163	Neutrophil cytosolic factor 1.	SH3 domain-containing protein.	0.939
NCF1	NOX4	ENSACAP00000018714	ENSACAP00000014675	Neutrophil cytosolic factor 1.	NADPH oxidase 4.	0.815
NCF1	Noxo1	ENSACAP00000018714	ENSACAP00000002329	Neutrophil cytosolic factor 1.	SH3 domain-containing protein.	0.680
NCF1	XK	ENSACAP00000018714	ENSACAP00000014627	Neutrophil cytosolic factor 1.	XK-related protein.	0.701