STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN1Reticulon. (743 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.595
REEP5
Receptor expression-enhancing protein.
    
 
 0.545
GCH1
GTP_cyclohydroI domain-containing protein.
    
   0.474
VTA1
Vesicle trafficking 1.
    
   0.474
OMG
Oligodendrocyte myelin glycoprotein.
    
 0.457
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
 0.427
SNX15
Sorting nexin 15.
    
   0.410
LRRC24
Leucine rich repeat containing 24.
    
 0.406
LNPK
Lunapark, ER junction formation factor.
    
 
 0.403
MAG
Myelin associated glycoprotein.
   
 
 0.402
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.