STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM26RNA binding motif protein 26. (1010 aa)    
Predicted Functional Partners:
ZFC3H1
Zinc finger C3H1-type containing.
   
 
 0.654
pabpn1
RRM domain-containing protein.
    
 
 0.480
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
    
 
 0.480
MTREX
Mtr4 exosome RNA helicase.
   
 
 0.476
LOC100565464
Uncharacterized protein.
      
 0.446
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.446
RNPS1
RNA binding protein with serine rich domain 1.
    
 
 0.444
KBTBD4
Kelch repeat and BTB domain containing 4.
      
 0.435
NOC3L
Nucleolar complex protein 3 homolog.
   
  
 0.412
EFCAB14
EF-hand calcium binding domain 14.
      
 0.404
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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