STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RD3Retinal degeneration 3, GUCY2D regulator. (197 aa)    
Predicted Functional Partners:
LPGAT1
Lysophosphatidylglycerol acyltransferase 1.
      
 0.609
LOC100558643
Uncharacterized protein.
    
 
 0.607
NEK2
NIMA related kinase 2.
      
 0.601
LCA5
Lebercilin LCA5.
  
   
 0.600
SPATA7
Spermatogenesis associated 7.
      
 0.560
KCNS3
Potassium voltage-gated channel modifier subfamily S member 3; Belongs to the potassium channel family.
      
 0.558
RPGRIP1
RPGR interacting protein 1.
      
 0.528
PRPH2
Peripherin 2.
    
 
 0.505
suco
SUN domain-containing protein.
      
 0.487
LOC103282736
Uncharacterized protein.
      
 0.487
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.