Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCNH | ERCC3 | ENSACAP00000000653 | ENSACAP00000009827 | Cyclin H; Belongs to the cyclin family. | ERCC excision repair 3, TFIIH core complex helicase subunit. | 0.996 |
CCNH | GTF2H1 | ENSACAP00000000653 | ENSACAP00000000059 | Cyclin H; Belongs to the cyclin family. | General transcription factor IIH subunit 1. | 0.997 |
CCNH | GTF2H3 | ENSACAP00000000653 | ENSACAP00000014975 | Cyclin H; Belongs to the cyclin family. | General transcription factor IIH subunit 3. | 0.999 |
CCNH | LOC100558064 | ENSACAP00000000653 | ENSACAP00000009988 | Cyclin H; Belongs to the cyclin family. | General transcription factor IIH subunit. | 0.993 |
CCNH | POLR1A | ENSACAP00000000653 | ENSACAP00000012126 | Cyclin H; Belongs to the cyclin family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.697 |
CCNH | TAF6L | ENSACAP00000000653 | ENSACAP00000003398 | Cyclin H; Belongs to the cyclin family. | TATA-box binding protein associated factor 6 like. | 0.836 |
CCNH | taf1d | ENSACAP00000000653 | ENSACAP00000014295 | Cyclin H; Belongs to the cyclin family. | Uncharacterized protein. | 0.558 |
CCNH | tbp | ENSACAP00000000653 | ENSACAP00000002524 | Cyclin H; Belongs to the cyclin family. | Uncharacterized protein. | 0.910 |
CCNH | ubtf | ENSACAP00000000653 | ENSACAP00000016948 | Cyclin H; Belongs to the cyclin family. | Uncharacterized protein. | 0.675 |
ERCC3 | CCNH | ENSACAP00000009827 | ENSACAP00000000653 | ERCC excision repair 3, TFIIH core complex helicase subunit. | Cyclin H; Belongs to the cyclin family. | 0.996 |
ERCC3 | GTF2H1 | ENSACAP00000009827 | ENSACAP00000000059 | ERCC excision repair 3, TFIIH core complex helicase subunit. | General transcription factor IIH subunit 1. | 0.999 |
ERCC3 | GTF2H3 | ENSACAP00000009827 | ENSACAP00000014975 | ERCC excision repair 3, TFIIH core complex helicase subunit. | General transcription factor IIH subunit 3. | 0.999 |
ERCC3 | LOC100558064 | ENSACAP00000009827 | ENSACAP00000009988 | ERCC excision repair 3, TFIIH core complex helicase subunit. | General transcription factor IIH subunit. | 0.999 |
ERCC3 | POLR1A | ENSACAP00000009827 | ENSACAP00000012126 | ERCC excision repair 3, TFIIH core complex helicase subunit. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.762 |
ERCC3 | TAF6L | ENSACAP00000009827 | ENSACAP00000003398 | ERCC excision repair 3, TFIIH core complex helicase subunit. | TATA-box binding protein associated factor 6 like. | 0.881 |
ERCC3 | tbp | ENSACAP00000009827 | ENSACAP00000002524 | ERCC excision repair 3, TFIIH core complex helicase subunit. | Uncharacterized protein. | 0.987 |
ERCC3 | ubtf | ENSACAP00000009827 | ENSACAP00000016948 | ERCC excision repair 3, TFIIH core complex helicase subunit. | Uncharacterized protein. | 0.693 |
GTF2H1 | CCNH | ENSACAP00000000059 | ENSACAP00000000653 | General transcription factor IIH subunit 1. | Cyclin H; Belongs to the cyclin family. | 0.997 |
GTF2H1 | ERCC3 | ENSACAP00000000059 | ENSACAP00000009827 | General transcription factor IIH subunit 1. | ERCC excision repair 3, TFIIH core complex helicase subunit. | 0.999 |
GTF2H1 | GTF2H3 | ENSACAP00000000059 | ENSACAP00000014975 | General transcription factor IIH subunit 1. | General transcription factor IIH subunit 3. | 0.999 |
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