STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubtfUncharacterized protein. (760 aa)    
Predicted Functional Partners:
POLR1A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.780
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.770
tbp
Uncharacterized protein.
   
 0.739
GTF2H1
General transcription factor IIH subunit 1.
    
 0.701
TAF6L
TATA-box binding protein associated factor 6 like.
   
 0.696
GTF2H3
General transcription factor IIH subunit 3.
    
 0.696
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.693
LOC100558064
General transcription factor IIH subunit.
    
 0.683
CCNH
Cyclin H; Belongs to the cyclin family.
    
 0.675
taf1d
Uncharacterized protein.
    
 0.668
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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