STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GYPC4.1m domain-containing protein. (65 aa)    
Predicted Functional Partners:
neu4
Sialidase domain-containing protein.
      
 0.659
CNTN1
Contactin 1.
   
 0.587
LOC100560576
Rieske domain-containing protein.
   
  
 0.493
CNTN2
Contactin 2.
   
 0.442
CNTN5
Contactin 5.
   
 0.426
cntn4
Contactin 4.
   
 0.418
CNTN6
Contactin 6.
   
 0.418
CNTN3
Contactin 3.
   
 0.418
LOC103282601
Uncharacterized protein.
   
 0.418
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.