STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103281311zf-3CxxC domain-containing protein. (163 aa)    
Predicted Functional Partners:
rnf213
RING-type domain-containing protein.
   
  
 0.660
usp18
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.637
isg15
Uncharacterized protein.
   
  
 0.591
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.505
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.505
LOC100567367
Uncharacterized protein.
   
    0.493
DHX58
DExH-box helicase 58.
   
  
 0.490
IFIH1
Interferon induced with helicase C domain 1.
   
  
 0.490
DDX58
DExD/H-box helicase 58.
   
  
 0.436
ANKRD13C
Ankyrin repeat domain 13C.
      
 0.435
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.