STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF827Zinc finger protein 827. (763 aa)    
Predicted Functional Partners:
rbbp4
RB binding protein 4, chromatin remodeling factor.
    
 0.782
DCLRE1B
DNA cross-link repair 1B.
    
 
 0.551
RNF166
Ring finger protein 166.
    
 0.536
ZNF276
Zinc finger protein 276.
      
0.517
NR2C1
Nuclear receptor subfamily 2 group C member 1.
    
 0.492
NR2C2
Nuclear receptor subfamily 2 group C member 2.
    
 0.455
HMBOX1
Homeobox containing 1.
      
 0.452
ZBTB39
Zinc finger and BTB domain containing 39.
      
 0.450
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.411
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.