STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9GT41_ANOCAUncharacterized protein. (189 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
   
 0.999
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.967
XPA
XPA, DNA damage recognition and repair factor.
    
 0.937
Slx4
Uncharacterized protein.
   
 0.902
FANCL
FA complementation group L.
    
 0.885
FANCG
FA complementation group G.
    
 0.884
FANCB
FA complementation group B.
    
 0.878
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
     
 0.771
GGPS1
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
 
      0.770
NARS1
Asparaginyl-tRNA synthetase.
   
 0.748
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.